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Blog

Best practices to clean up Active Directory

Written by Andrew PrasannaActive Directory 3 min read

On this page
  • Why clean up your Active Directory environment?
  • How to clean up Active Directory
  • Expert tips: Best practices for AD cleanup
  • Top tools to simplify Active Directory cleanup
  • FAQ

Why clean up your Active Directory environment?

Active Directory (AD) cleanup involves regularly removing or disabling inactive, unused, and duplicate user and computer accounts, as well as managing security groups and Group Policy Objects (GPOs) to maintain a secure and efficient environment. Neglecting cleanup can expose organizations to security breaches, audit failures, and costly IT problems due to cluttered directories. Real-world breaches highlight this danger—for example, a United States state government breach involved attackers exploiting inactive AD credentials to gain unauthorized access.

How to clean up Active Directory

To carry out AD cleanup effectively, it's best to have a well-defined set of best practices to ensure nothing is overlooked. By breaking the process into clear, repeatable steps, you can turn cleanup from a one-time task into an ongoing routine that maintains both security and performance.

The Active Directory cleanup checklist

The following best practices outline the most important steps to safeguard your environment, maintain optimal performance, and keep your directory free from risky objects.

  • Remove inactive accounts

    Regularly remove or disable accounts that are no longer in use. These accounts serve as prime targets for attackers who can use them for unauthorized access without attracting attention. Cleaning them up reduces the attack surface and improves account management efficiency.

  • Audit disabled accounts

    Disabled accounts can pose security risks if re-enabled without authorization. Regular auditing helps detect suspicious activity early and ensures only authorized personnel can modify these accounts.

  • Monitor new account creation

    Monitoring new accounts can help you quickly spot and remove those created by attackers, insiders, or malware. Early detection stops threats and ensures only approved accounts exist.

  • Manage security groups and distribution lists

    Disable or delete unnecessary security groups and distribution lists. Ensure each group has an assigned owner and that memberships are regularly reviewed. Poorly managed groups can lead to privilege sprawl, granting users access they no longer need and increasing the risk of misuse.

  • Clean up outdated GPOs

    Regularly review and remove outdated or unused GPOs. Outdated GPOs can cause configuration conflicts and even security gaps if legacy settings override modern policies.

  • Enforce strong password policies

    Implement and enforce strong password policies and audit user passwords to detect usage of compromised passwords. Inactive accounts are known to use default and outdated credentials, so ensuring active accounts maintain a high security standard is key.

  • Regularly review and update ACLs

    Reviewing access control lists (ACLs) ensures that users only have the minimum permissions necessary to perform their functions and minimizes the risk of unauthorized data access.

  • Regularly review and remove DNS records

    Maintain up-to-date DNS records by removing outdated or incorrect records associated with AD objects, preventing network resolution issues.

  • Automate the process

    Automate the cleanup process using scripts or tools to save time and ensure consistency. Automation not only speeds up the process but also eliminates human error, ensuring tasks are carried out consistently across the entire directory.

  • Document changes

    Maintain documentation of all cleanup activities, including the reason for each change and how it was implemented.

Expert tips: Best practices for AD cleanup

Anupriya is an AD and identity management expert with extensive experience in AD administration, security, and operational best practices. Helping organizations maintain secure, efficient, and compliant AD environments, she shares actionable insights grounded in real-world challenges and solutions.

Effective AD cleanup is essential for reducing risks and maintaining system health. Here's how I recommend approaching it:

  • Start with inactive and disabled accounts: Identify and remove stale accounts early to reduce security risks and clutter.
  • Prioritize by risk: Focus cleanup on high-risk accounts, privileged groups, and outdated GPOs first.
  • Automate cleanups: Schedule periodic cleanups using automation tools to maintain AD hygiene.
  • Keep records: Document changes to assist compliance and troubleshooting.
  • Think like an attacker: Look for leftover privileges or misconfigurations that could be exploited.

Top tools to simplify Active Directory cleanup

ManageEngine ADManager Plus, an AD management and reporting tool, offers features to clean up and optimize your AD environment. It helps you identify inactive, disabled, and expired AD accounts, letting you manage them directly from the generated reports. Its intuitive interface automates cleanup, saving time, avoiding complex scripts, and enhancing overall AD hygiene.

Automate AD cleanup and maintain hygiene with ADManager Plus

FAQ

1. How do I clean up old Active Directory computers?

To clean up old computers in AD, you can use ADManager Plus to quickly identify inactive or unused computer accounts by generating reports based on last logon or password last set times. You can easily delete, disable, or move stale computer accounts to another OU, directly from the reports without needing complex scripts.

2. How do I perform an Active Directory metadata cleanup?

You can clean up AD metadata using three methods: through the Active Directory Users and Computers console, the Active Directory Sites and Services console, or via the command line using the Ntdsutil tool. Using any of these methods, you can delete the metadata of a decommissioned domain controller and address any roles it holds. Refer to Microsoft's documentation for the complete steps.

3. How do I clear the cache in Active Directory?

To clear the cache in AD, you can restart Active Directory Domain Services or force a replication. You can use the Command Prompt to run commands like repadmin and replicate to update and refresh cached records. In some cases, clearing the DNS cache using the ipconfig /flushdns command is recommended if there are name resolution issues. For changes like group memberships or policies, logging off and back on or rebooting affected systems may also refresh cached credentials and settings.

4. How do I check if Active Directory is functioning properly?

To check if AD is functioning properly, you can perform several verifications using command-line tools:

Dcdiag: This is the primary tool to run diagnostic tests on domain controllers. Start by running diagnostic tests on domain controllers and checking the health of AD services, replication, and the DNS. A clean output indicates that the domain controller is in a healthy state.

Repadmin: This checks the replication status between domain controllers for any errors or delays. Verify that domain controllers are responding to LDAP queries and that users can authenticate without issues.

GUI-based tools: Alternatively, you can use script-free tools like ADManager Plus, which enables you to monitor replication health, identify errors, and force domain controller replication from a single interface.

 

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