Suspicious File Encoded To Base64 Via Certutil.EXE
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In this page
Rule name | Rule type | Log sources | MITRE ATT&CK tags | Severity |
Suspicious File Encoded To Base64 Via Certutil.EXE | Standard | Windows | Defense Evasion: Obfuscated Files or Information (T1027) | Critical |
About the rule
Rule Type
Standard
Rule Description
Certutil.exe is a built-in Windows tool used for certificate and file management, but attackers often abuse it to encode malicious files in Base64 format. This technique helps obfuscate payloads, evade signature-based detection, and facilitate covert data exfiltration or staging for later execution. The rule detects instances where certutil.exe is used with the encode flag—especially when used on suspicious file types or in unusual directories. While encoding can serve legitimate purposes, its misuse by adversaries is a hallmark of living-off-the-land and stealthy post-exploitation tactics.
Severity
Trouble
Rule journey
Attack chain scenario
Initial access → Execution → Living-off-the-land binary (LOLBins) abuse → certutil.exe used to encode file to Base64 → Obfuscation of malicious payload or preparation for exfiltration → File transfer or later decoding/execution → Persistence or data exfiltration
Impact
- Malware staging
- Defense evasion
- Data exfiltration
- Persistence
- Incident response delays
Rule Requirement
Prerequisites
Using Windows event viewer:
To enable detailed process tracking in a domain environment, log in to a domain controller using domain admin credentials and open the Group Policy Management Console (GPMC). Create or edit a GPO linked to the target OU and navigate to the Advanced Audit Policy Configuration section to enable success auditing for both process creation and termination. To capture command-line details, enable the Include command line in process creation events setting under Audit Process Creation. Additionally, create the Microsoft-Windows-Security-Auditing/Operational registry key in the specified EventLog path to support enhanced auditing.
Using Sysmon:
To enable detailed process monitoring using Sysmon, first download and install it from Microsoft Sysinternals. Run Command Prompt as an administrator and install Sysmon with a configuration file that includes process creation tracking using sysmon.exe -i [configfile.xml]. Ensure your configuration includes a <ProcessCreate> filter to capture all process creation events. Additionally, create the Microsoft-Windows-Sysmon/Operational registry key under the EventLog path if it doesn’t already exist.
Criteria
Action1: actionname = "Process started" AND (PROCESSNAME endswith "\certutil.exe" OR ORIGINALFILENAME = "CertUtil.exe") AND COMMANDLINE contains "-encode,/encode,–encode,—encode,―encode" AND COMMANDLINE contains ".acl,.bat,.doc,.gif,.jpeg,.jpg,.mp3,.pdf,.png,.ppt,.tmp,.xls,.xml" select Action1.HOSTNAME,Action1.MESSAGE,Action1.COMMANDLINE,Action1.FILE_NAME,Action1.PROCESSNAME,Action1.USERNAME,Action1.PARENTPROCESSNAME
Detection
Execution Mode
realtime
Log Sources
Windows
MITRE ATT&CK
Defense Evasion: Obfuscated Files or Information (T1027)
Security standard:
Enabling this rule will help you meet the security standard's requirement listed below:
DE.CM-09: Computing hardware and software, runtime environments, and their data are monitored to find potentially adverse events
When this rule is triggered, you're notified of a file being encoded to Base64 using certutil.exe—a behavior often associated with data obfuscation or exfiltration preparation.
Author
Nasreddine Bencherchali (Nextron Systems)
Future actions
Known False Positives
This rule may be triggered by legitimate administrative or development activities where certutil.exe is used to encode files for backup, transport, or scripting purposes.
Next Steps
When this rule is triggered, the following measures can be implemented:
- Identification: Review the command-line arguments passed to certutil.exe and identify the user, the source file, and the destination path to look for behaviour deviation.
- Analysis: Analyze file content and any follow-up activity such as decoding, execution, or file transfers. Correlate with recent alerts for signs of staging, exfiltration, or command-and-control (C2) setup.
- Response: Isolate the affected system, terminate any associated processes, and delete encoded payloads. Block further use of certutil.exe and inspect nearby systems for signs of lateral movement.
- Monitor certutil.exe: Restrict the use of certutil.exe to authorized users via group policies or application control.
Mitigation
Mitigation ID | Mitigation Name | Mitigation description |
M1049 | Anti-virus can be used to automatically detect and quarantine suspicious files. | |
M1047 | Enable periodic review of common fileless storage locations such as the Registry or WMI repository. | |
M1040 | On Windows 10 and newer, enable Attack Surface Reduction (ASR) rules to prevent execution of potentially obfuscated payloads. | |
M1017 | Make sure that a software deployment system has only a limited number of entry points with restricted access for individuals. |


